SNP Profiles of GU 221 /H View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CC	AG	CC	CC	TT	AA	TT	GT	TT	CC	AT	GG	CC	AA
1._GC-01-074-4-10	CC	AG	CC	CC	TT	AA	TT	GT	TT	CC	AT	GG	CC	AA
2._GC-01-074-4-10	CC	AG	GG	CC	TT	_	TT	TT	CC	CC	AA	GG	CC	AA
3._GC-01-074-4-10	CC	AG	GG	CC	TT	_	TT	TT	CC	CC	AA	GG	CC	AA
4._GC-01-074-4-10	CC	AG	GG	CC	TT	_	TT	TT	CC	CC	AA	GG	CC	AA
5._GC-01-074-4-10	CC	AG	GG	CC	TT	_	TT	TT	CC	CC	AA	GG	CC	AA
6._GC-01-074-4-10	CC	AG	GG	CC	TT	_	TT	TT	CC	CC	AA	GG	CC	AA
7._GC-01-074-4-10	CC	AG	GG	CC	TT	_	TT	TT	CC	CC	AA	GG	CC	AA
8._GC-01-074-4-10	CC	AG	GG	CC	TT	_	TT	TT	CC	CC	AA	GG	CC	AA
9._GU_221_/H	CC	AG	GG	CC	TT	_	TT	TT	CC	CC	AA	GG	CC	AA
10._GU_221_/H	CC	AG	GG	CC	TT	_	TT	TT	CC	CC	AA	GG	CC	AA
11._GU_221_/H	CC	AG	GG	CC	TT	_	TT	TT	CC	CC	AA	GG	CC	AA
12._GU_221_/H	CC	AG	GG	CC	TT	_	TT	TT	CC	CC	AA	GG	CC	AA
13._GU_221_/H	CC	AG	GG	CC	TT	_	TT	TT	CC	CC	AA	GG	CC	AA
14._GU_221_/H	CC	AG	GG	CC	TT	_	TT	TT	CC	CC	AA	GG	CC	AA
15._GU_221_/H	CC	AG	GG	CC	TT	_	TT	TT	CC	CC	AA	GG	CC	AA
16._GC-01-74-4-10	GG	AG	CC	GG	AA	_	AA	AA	_	_	AA	GG	GG	AA
17._GU_221_H_Fld#_162_Plt#_1	GG	AG	CC	GG	AA	CC	AA	AA	_	_	AA	GG	GG	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CC	TT	CG	CT	TT	CC	GG	AA	TT	CC	GG	GG	CC	AC
1._GC-01-074-4-10	CC	TT	CG	CT	TT	CC	GG	AA	TT	CC	GG	GG	CC	AC
2._GC-01-074-4-10	TT	AA	GG	CC	CC	GG	GG	AG	CC	CC	CC	GG	CC	AA
3._GC-01-074-4-10	TT	AA	GG	CC	CC	GG	GG	AG	CC	CC	CC	GG	CC	AA
4._GC-01-074-4-10	TT	AA	GG	CC	CC	GG	GG	AG	CC	CC	CC	GG	CC	AA
5._GC-01-074-4-10	TT	AA	GG	CC	CC	GG	GG	AG	CC	CC	CC	GG	CC	AA
6._GC-01-074-4-10	TT	AA	GG	CC	CC	GG	GG	AG	CC	CC	CC	GG	CC	AA
7._GC-01-074-4-10	TT	AA	GG	CC	CC	GG	GG	AG	CC	CC	CC	GG	CC	AA
8._GC-01-074-4-10	TT	AA	GG	CC	CC	GG	GG	AG	CC	CC	CC	GG	CC	AA
9._GU_221_/H	TT	AA	GG	CC	CC	GG	GG	AG	CC	CC	CC	GG	CC	AA
10._GU_221_/H	TT	AA	GG	CC	CC	GG	GG	AG	CC	CC	CC	GG	CC	AA
11._GU_221_/H	TT	AA	GG	CC	CC	GG	GG	AG	CC	CC	CC	GG	CC	AA
12._GU_221_/H	TT	AA	GG	CC	CC	GG	GG	AG	CC	CC	CC	GG	CC	AA
13._GU_221_/H	TT	AA	GG	CC	CC	GG	GG	AG	CC	CC	CC	GG	CC	AA
14._GU_221_/H	TT	AA	GG	CC	CC	GG	GG	AG	CC	CC	CC	GG	CC	AA
15._GU_221_/H	TT	AA	GG	CC	CC	GG	GG	AG	CC	CC	CC	GG	CC	AA
16._GC-01-74-4-10	AA	AA	GG	GG	GG	CC	CC	_	GG	CC	CC	CC	_	AA
17._GU_221_H_Fld#_162_Plt#_1	AA	AA	GG	GG	GG	CC	CC	_	GG	CC	CC	CC	_	AA

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	GG	GG	AA	TT	GG	CG	CC	TT	GG	AC	AA	GG	X_X	X_X
1._GC-01-074-4-10	GG	GG	AA	TT	GG	CG	CC	TT	GG	AC	AA	GG	X_X	X_X
2._GC-01-074-4-10	AG	GG	AA	CC	GG	CC	AA	TT	TT	AA	AA	GG	X_X	X_X
3._GC-01-074-4-10	AG	GG	AA	CC	GG	CC	AA	TT	TT	AA	AA	GG	X_X	X_X
4._GC-01-074-4-10	AG	GG	AA	CC	GG	CC	AA	TT	TT	AA	AA	GG	X_X	X_X
5._GC-01-074-4-10	AG	GG	AA	CC	GG	CC	AA	TT	TT	AA	AA	GG	X_X	X_X
6._GC-01-074-4-10	AG	GG	AA	CC	GG	CC	AA	TT	TT	AA	AA	GG	X_X	X_X
7._GC-01-074-4-10	AG	GG	AA	CC	GG	CC	AA	TT	TT	AA	AA	GG	X_X	X_X
8._GC-01-074-4-10	AG	GG	AA	CC	GG	CC	AA	TT	TT	AA	AA	GG	X_X	X_X
9._GU_221_/H	AG	GG	AA	CC	GG	CC	AA	TT	TT	AA	AA	GG	X_X	X_X
10._GU_221_/H	AG	GG	AA	CC	GG	CC	AA	TT	TT	AA	AA	GG	X_X	X_X
11._GU_221_/H	AG	GG	AA	CC	GG	CC	AA	TT	TT	AA	AA	GG	X_X	X_X
12._GU_221_/H	AG	GG	AA	CC	GG	CC	AA	TT	TT	AA	AA	GG	X_X	X_X
13._GU_221_/H	AG	GG	AA	CC	GG	CC	AA	TT	TT	AA	AA	GG	X_X	X_X
14._GU_221_/H	AG	GG	AA	CC	GG	CC	AA	TT	TT	AA	AA	GG	X_X	X_X
15._GU_221_/H	AG	GG	AA	CC	GG	CC	AA	TT	TT	AA	AA	GG	X_X	X_X
16._GC-01-74-4-10	_	GG	AA	GG	GG	GG	AA	AA	AA	AA	AA	GG	X_X	X_X
17._GU_221_H_Fld#_162_Plt#_1	_	GG	AA	GG	GG	GG	AA	AA	AA	AA	AA	GG	X_X	X_X

Input profile: GU_221_/H

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Mars Center for Cocoa Science, Brazil

Location: 7410 ( >> 1410) 4 > FP

Dapeng Zhang, 2016

1._GU_221_/H GC-01-074-4-10

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4 > FP3

2._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 16

Notes: 16

3._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 15

Notes: 15

4._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 14

Notes: 14 > FP4

5._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12 > FP2

6._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9

7._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

8._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

9._GU_221_/H

60.3 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 7410 ( >> 1410) 6

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

10._GU_221_/H

60.3 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 7410 ( >> 1410) 9

Dapeng Zhang, 2016

11._GU_221_/H

60.3 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 7410 ( >> 1410) 15

Dapeng Zhang, 2016

12._GU_221_/H

60.3 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 7410 ( >> 1410) 16

Dapeng Zhang, 2016

13._GU_221_/H

60.3 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 7410 ( >> 1410) 1 > FP

Dapeng Zhang, 2016

14._GU_221_/H

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 7410 ( >> 1410) 12 > F

Dapeng Zhang, 2016

15._GU_221_/H

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 7410 ( >> 1410) 14 > F

Dapeng Zhang, 2016

16._GU_221_/H GC-01-74-4-10

39.7 %
34 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Field: 1, Block: 4, Rep: 10, Tree: 6

Notes: MCCS_Structure_refs_above_0.9membership

17._GU_221_/H GU_221_H_Fld#_162_Plt#_1

38.6 %
35 shared markers

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USDA-TARS, United States of America

Location: Field: 162, Tree: 1

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP226	35	TcSNP193
36	TcSNP151	37	TcSNP150	38	TcSNP144	39	TcSNP32	40	TcSNP25